Chemical Structures with Ketcher editor (PubChem, Molfile)
OVERALL RATINGS
INSTALLS
2
SUPPORT
- Partner Supported
TRUST SIGNALS
Key highlights of the appThe chemical structure editor Confluence was always missing
Draw, don't type
Chemical Structures embeds Ketcher — the same open-source structure editor used by PubChem. It works exactly like ChemDraw.
Already have a SMILES string? Paste it in and the structure renders instantly.
Renders beautifully — every time
We store the complete Molfile with 2D coordinates instead of converting to SMILES. The structure rendered on the page is exactly what you drew — wedge bonds, stereocenters, chair conformations, and all.
Click to edit, anywhere
Any author with edit access can click the structure and reopen the full editor — no plugins to install, no desktop software required.
Readers see a clean vector image.
More details
Built for chemistry and life science teams in pharma, biotech, materials science, and academia.
- Draw structures directly in Confluence — no switching between tools
- WYSIWYG editor powered by Ketcher (EPAM Systems)
- Renders as crisp, auto-sizing vector graphics on every page
- Molfile format — compatible with ChemDraw, MarvinSketch, and other tools
Runs on Atlassian: all processing runs exclusively on Atlassian's own infrastructure. Molecular data never reaches external servers — safe for organizations with strict data residency, enterprise security, or compliance requirements.
Ideal for: pharmaceutical R&D documentation, chemical synthesis workflows, academic lab notebooks, and IP/patent documentation.
Language support: English
Resources
App documentation
Comprehensive set of documentation from the partner on how this app works
Privacy and Security
Privacy policy
Atlassian's privacy policy is not applicable to the use of this app. Please refer to the privacy policy provided by this app's partner.
Partner privacy policySecurity program
This app is not part of the Marketplace Bug Bounty program.
Version information
Version 2.3.0•for Confluence Cloud
- Release date
- Jun 2nd 2026
- Summary
- Minor version update
- Details
- Minor version update
- Payment model
- Paid via Atlassian
- License type
- Commercial