Chemistry Toolkit for Confluence

for Confluence Cloud, Confluence Server 6.15.1 - 8.1.4 and more
46 installs
  • Supported
Free app

Display 2D & 3D chemical structures in Confluence

YouTube's thumbnail image for the video.

Create 2D chemical structures from SMILES text

Just paste and go.

3D Molecular Structures

Using PDB identifier

Simple to use

Add your SMILES text and go.

More details

  • SMILES macro
    • Colour coding for different elements
    • Set height and width
  • PDB 3D Molecule macro
    • Full 3D visualisation for PDB files
    • Set height and width
  • Table from CSV with Rendering macro
    • Takes an attached CSV
    • Renders to table based on the header row
    • Renders the following
      • SMILES format to 2d chemical structures
      • web and email links
      • markdown format links
    • Table sorts on header click
      • sort either numeric or alpha numeric, based on cell contents
      • rendered links are sorted on the basis of the link text
    • wrapping or no wrap on cell contents
  • Further macros to follow as requested

Privacy and security

Privacy policy

Atlassian's privacy policy is not applicable to the use of this app. Please refer to the privacy policy provided by this app's partner.

Partner privacy policy


This app is not part of the Marketplace Bug Bounty program. Learn more
This partner has completed the Security Self-Assessment Program. Learn more

We've introduced detailed information on privacy, security, data handling, and compliance practices followed by this app.


Integration Details

Chemistry Toolkit for Confluence integrates with your Atlassian product. This remote service can:

  • Read data from the host application